H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID:
HIT000069829
Accession number:
AF114013
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to Tumor necrosis factor ligand superfamily member 13 isoform gamma proprotein.
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
26 .. 26
G/A
rs190038454
+
5'UTR
58 .. 58
G/A
rs112492417
+
5'UTR
147 .. 147
G/A
rs181623923
+
5'UTR
179 .. 179
C/T
rs186358612
+
5'UTR
317 .. 317
G/C
rs138476542
+
CDS
Nonsynonymous[Val22Leu]
365 .. 365
G/T
rs201860460
+
CDS
Nonsynonymous[Ala38Ser]
366 .. 366
C/T
rs142987696
+
CDS
Nonsynonymous[Ala38Val]
452 .. 452
G/A
rs11552708
+
CDS
Nonsynonymous[Gly67Arg]
474 .. 474
A/G
rs138823376
+
CDS
Nonsynonymous[Asn74Ser]
478 .. 478
G/C
rs12942687
+
CDS
Synonymous[Gly75Gly]
540 .. 540
A/G
rs3803800
+
CDS
Nonsynonymous[Asn96Ser]
625 .. 625
C/T
rs138604224
+
CDS
Synonymous[Asn124Asn]
664 .. 664
G/A
rs148497612
+
CDS
Nonsynonymous[Met137Ile]
681 .. 681
G/-
rs34476700
+
CDS
732 .. 732
C/T
rs7503669
+
CDS
Nonsynonymous[Ala160Val]
833 .. 833
T/C
rs145345809
+
CDS
Nonsynonymous[Phe194Leu]
842 .. 842
A/G
rs147443869
+
CDS
Nonsynonymous[Ile197Val]
856 .. 856
C/T
rs61760045
+
CDS
Synonymous[Pro201Pro]
864 .. 864
C/T
rs139748549
+
CDS
Nonsynonymous[Pro204Leu]
867 .. 867
A/T
rs141602266
+
CDS
Nonsynonymous[Asp205Val]
869 .. 869
C/T
rs201011600
+
CDS
Nonsynonymous[Arg206Trp]
875 .. 875
T/G
rs145250389
+
CDS
Nonsynonymous[Tyr208Asp]
941 ^ 942
-/C
rs34362644
+
CDS
955 .. 955
G/A
rs150976338
+
CDS
Synonymous[Ala234Ala]
1022 .. 1022
C/T
rs201836244
+
3'UTR
1022 ^ 1023
-/C
rs35424738
+
3'UTR
1088 .. 1088
T/C
rs6608
+
3'UTR
1249 .. 1249
C/T
rs189608582
+
3'UTR
1293 .. 1293
C/T
rs138292852
+
3'UTR
1431 .. 1431
T/C
rs183950986
+
3'UTR
1446 ^ 1447
-/G
rs149819305
+
3'UTR
1557 .. 1557
G/A
rs149609747
+
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
No data available
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene;
Repeat Mask Viewer
;