H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000071750 Accession number: AF152324 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protocadherin gamma-A4; PCDH-gamma-A4; Precursor;
 
 

Motif information
ORF

length(931),orf(1:2796)
MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAK
DLGLAPRELAERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSP
NCVTNLEILLEDTVKILRVEVEIIDVNDNPPSFGTEQREIKVAENENPGA
RFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYPELVLERAL
DREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVS
VRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD
ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVT
SLTSSVQESSSPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGN
YYRLLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPP
TFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAP
LSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSL
FVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ
NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHG
QPPLSATVTLTVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAV
SCVFLAFVTVLLALKLRRWHKSRLLHAEGSRLAGVPASHFVGVDGVRAFL
QTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKSEPLLITQDLLET
KGDPNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM
ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK*
a.a.
length
InterPro Name
length(91), motif(29:119) 91 IPR015919 Cadherin-like [Domain]
length(84), motif(29:112) 84 IPR013164 Cadherin, N-terminal [Domain]
length(98), motif(31:128) 98 IPR002126 Cadherin [Domain]
length(87), motif(45:131) 87 IPR002126 Cadherin [Domain]
length(20), motif(73:92) 20 IPR002126 Cadherin [Domain]
length(59), motif(75:133) 59 IPR002126 Cadherin [Domain]
length(11), motif(121:131) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(109), motif(126:234) 109 IPR015919 Cadherin-like [Domain]
length(111), motif(129:239) 111 IPR002126 Cadherin [Domain]
length(109), motif(134:242) 109 IPR002126 Cadherin [Domain]
length(92), motif(139:230) 92 IPR002126 Cadherin [Domain]
length(86), motif(155:240) 86 IPR002126 Cadherin [Domain]
length(11), motif(230:240) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(104), motif(236:339) 104 IPR015919 Cadherin-like [Domain]
length(104), motif(240:343) 104 IPR002126 Cadherin [Domain]
length(30), motif(242:271) 30 IPR002126 Cadherin [Domain]
length(105), motif(243:347) 105 IPR002126 Cadherin [Domain]
length(92), motif(247:338) 92 IPR002126 Cadherin [Domain]
length(82), motif(264:345) 82 IPR002126 Cadherin [Domain]
length(11), motif(335:345) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(104), motif(341:444) 104 IPR015919 Cadherin-like [Domain]
length(105), motif(344:448) 105 IPR002126 Cadherin [Domain]
length(105), motif(348:452) 105 IPR002126 Cadherin [Domain]
length(88), motif(355:442) 88 IPR002126 Cadherin [Domain]
length(82), motif(369:450) 82 IPR002126 Cadherin [Domain]
length(13), motif(417:429) 13 IPR002126 Cadherin [Domain]
length(20), motif(431:450) 20 IPR002126 Cadherin [Domain]
length(11), motif(440:450) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(127), motif(441:567) 127 IPR015919 Cadherin-like [Domain]
length(115), motif(449:563) 115 IPR002126 Cadherin [Domain]
length(14), motif(450:463) 14 IPR002126 Cadherin [Domain]
length(115), motif(453:567) 115 IPR002126 Cadherin [Domain]
length(96), motif(457:552) 96 IPR002126 Cadherin [Domain]
length(87), motif(474:560) 87 IPR002126 Cadherin [Domain]
length(27), motif(510:536) 27 IPR002126 Cadherin [Domain]
length(18), motif(544:561) 18 IPR002126 Cadherin [Domain]
length(11), motif(550:560) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(111), motif(556:666) 111 IPR015919 Cadherin-like [Domain]
length(88), motif(579:666) 88 IPR002126 Cadherin [Domain]
length(104), motif(579:682) 104 IPR002126 Cadherin [Domain]
length(83), motif(582:664) 83 IPR002126 Cadherin [Domain]
length(79), motif(591:669) 79 IPR002126 Cadherin [Domain]