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H-Invitational ID: HIT000071750 Accession number: AF152324 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protocadherin gamma-A4; PCDH-gamma-A4; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
35 .. 35 G/C rs146402451 + CDS Nonsynonymous[Arg12Pro]
40 .. 40 C/T rs199669967 + CDS Nonsynonymous[Leu14Phe]
44 .. 44 A/G rs200737190 + CDS Nonsynonymous[Gln15Arg]
64 .. 64 G/T rs201894028 + CDS Nonsynonymous[Val22Phe]
88 .. 88 C/G rs73265823 + CDS Nonsynonymous[Gln30Glu]
221 .. 221 T/- rs35876439 + CDS
316 .. 316 C/T rs201107501 + CDS Synonymous[Leu106Leu]
352 .. 352 C/A rs182004159 + CDS Synonymous[Arg118Arg]
399 .. 399 T/G rs186599132 + CDS Nonsynonymous[Phe133Leu]
430 .. 430 G/A rs189922397 + CDS Nonsynonymous[Glu144Lys]
448 .. 448 G/A rs11575949 + CDS Nonsynonymous[Ala150Thr]
454 .. 454 T/C rs199886630 + CDS Nonsynonymous[Phe152Leu]
497 ^ 498 -/C rs34873187 + CDS
569 .. 569 A/C rs73265825 + CDS Nonsynonymous[Lys190Thr]
638 .. 638 C/A rs201855847 + CDS Nonsynonymous[Thr213Lys]
732 .. 732 G/T rs139771811 + CDS Nonsynonymous[Gln244His]
744 .. 744 C/T rs181172875 + CDS Synonymous[His248His]
844 .. 844 C/T rs185441391 + CDS Nonsynonymous[Arg282Trp]
850 .. 850 G/T rs142728816 + CDS Nonsynonymous[Val284Leu]
852 .. 852 A/C rs189801389 + CDS Synonymous[Val284Val]
1379 .. 1379 A/G rs115115119 + CDS Nonsynonymous[Tyr460Cys]
1385 .. 1385 C/G rs11575950 + CDS Nonsynonymous[Pro462Arg]
1474 .. 1474 G/T rs182109278 + CDS Nonsynonymous[Ala492Ser]
1520 .. 1520 T/A rs200566433 + CDS Nonsynonymous[Ile507Asn]
1686 .. 1686 C/G rs207466434 + CDS Nonsynonymous[Ile562Met]
1707 .. 1707 T/G rs17097226 + CDS Synonymous[Thr569Thr]
1710 .. 1710 T/A rs187434280 + CDS Nonsynonymous[Asp570Glu]
1787 .. 1787 G/A rs146063218 + CDS Nonsynonymous[Arg596Lys]
1922 .. 1922 G/A rs4329068 + CDS Nonsynonymous[Arg641Lys]
2021 .. 2021 A/G rs201265946 + CDS Nonsynonymous[Asp674Gly]
2031 .. 2031 C/T rs111925753 + CDS Synonymous[Ser677Ser]
2047 .. 2047 G/C rs11575951 + CDS Nonsynonymous[Asp683His]
2073 .. 2073 C/G rs111314276 + CDS Synonymous[Leu691Leu]
2079 .. 2079 C/T rs139727169 + CDS Synonymous[Leu693Leu]
2100 .. 2100 C/G rs112089502 + CDS Synonymous[Val700Val]
2208 .. 2208 T/C rs73792169 + CDS Synonymous[Pro736Pro]
2252 .. 2252 A/T rs191856685 + CDS Nonsynonymous[Gln751Leu]
2342 .. 2342 G/A rs149810895 + CDS Nonsynonymous[Ser781Asn]
2458 .. 2458 G/A rs201391904 + CDS Nonsynonymous[Ala820Thr]
2470 .. 2470 G/A rs200418116 + CDS Nonsynonymous[Gly824Ser]
2526 .. 2526 T/C rs149352680 + CDS Synonymous[Phe842Phe]
2625 .. 2625 C/T rs143630962 + CDS Synonymous[Ser875Ser]
2626 .. 2626 G/A rs114669158 + CDS Nonsynonymous[Ala876Thr]
2629 .. 2629 C/T rs148119281 + CDS Nonsynonymous[Arg877Cys]
2634 .. 2634 C/T rs141873183 + CDS Synonymous[Tyr878Tyr]
2637 .. 2637 A/G rs2233612 + CDS Synonymous[Gly879Gly]
2659 .. 2659 G/A rs116366286 + CDS Nonsynonymous[Val887Met]
2672 .. 2672 G/A rs61749029 + CDS Nonsynonymous[Arg891His]
2699 .. 2699 A/G rs201009079 + CDS Nonsynonymous[Asn900Ser]
2715 .. 2715 C/T rs143362044 + CDS Synonymous[Asn905Asn]
2758 .. 2758 G/A rs200541479 + CDS Nonsynonymous[Gly920Ser]
2774 .. 2774 C/T rs202071188 + CDS Nonsynonymous[Ser925Leu]
2793 .. 2793 G/A rs147534370 + CDS Synonymous[Lys931Lys]
2825 .. 2825 C/T rs201024828 + 3'UTR
2826 .. 2826 G/A rs2233613 + 3'UTR
2931 .. 2931 G/A rs76613492 + 3'UTR
2987 .. 2987 T/C rs115159796 + 3'UTR
2997 .. 2997 C/A rs191106767 + 3'UTR
3233 .. 3233 C/A rs146235929 + 3'UTR
3251 .. 3251 G/C rs4912608 + 3'UTR
3326 .. 3326 T/G rs148447880 + 3'UTR
3488 .. 3488 G/A rs142624814 + 3'UTR
3509 .. 3509 T/C rs113814137 + 3'UTR
3515 .. 3515 C/T rs150999050 + 3'UTR
3522 .. 3522 T/G rs187622252 + 3'UTR
3711 .. 3711 A/G rs192947391 + 3'UTR
3794 .. 3794 T/C rs140884268 + 3'UTR
3817 .. 3817 G/A rs111365449 + 3'UTR
4008 .. 4008 A/G rs78180647 + 3'UTR
4076 .. 4076 G/A rs185198109 + 3'UTR
4169 .. 4169 C/T rs147780926 + 3'UTR
4462 .. 4462 C/T rs141207714 + 3'UTR
4481 .. 4481 G/T rs189734474 + 3'UTR
4537 .. 4537 C/T rs112402554 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer