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H-Invitational ID: HIT000071754 Accession number: AF152328 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protocadherin gamma-A8; PCDH-gamma-A8; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
30 .. 30 C/T rs77141792 + CDS Synonymous[Arg10Arg]
31 .. 31 G/C rs201895231 + CDS Nonsynonymous[Gly11Arg]
47 .. 47 T/G rs726684 + CDS Nonsynonymous[Leu16Arg]
193 .. 193 C/T rs182052960 + CDS Nonsynonymous[Arg65Cys]
299 .. 299 C/T rs148589854 + CDS Nonsynonymous[Pro100Leu]
307 .. 307 C/T rs142751758 + CDS Synonymous[Leu103Leu]
356 .. 356 T/C rs113280752 + CDS Nonsynonymous[Val119Ala]
429 .. 429 C/T rs151037104 + CDS Synonymous[Asn143Asn]
442 .. 442 C/G rs201229959 + CDS Nonsynonymous[Pro148Ala]
519 .. 519 C/- rs3214276 + CDS
561 .. 561 T/G rs11575958 + CDS Nonsynonymous[Asn187Lys]
601 .. 601 G/C rs199973289 + CDS Nonsynonymous[Asp201His]
639 .. 639 G/T rs189963623 + CDS Synonymous[Thr213Thr]
645 .. 645 G/A rs181214352 + CDS Synonymous[Ser215Ser]
662 .. 662 C/G rs200282311 + CDS Nonsynonymous[Pro221Arg]
669 .. 669 T/C rs116240246 + CDS Synonymous[Ser223Ser]
701 .. 701 A/T rs72492419 + CDS Nonsynonymous[Asp234Val]
731 .. 731 A/G rs72790032 + CDS Nonsynonymous[His244Arg]
779 .. 779 G/A rs200863279 + CDS Nonsynonymous[Arg260Gln]
845 .. 845 G/A rs141295392 + CDS Nonsynonymous[Arg282Gln]
897 .. 897 G/T rs143738602 + CDS Synonymous[Gly299Gly]
905 .. 905 C/G rs185464441 + CDS AA-STOP[Ser302*]
916 .. 916 A/G rs189824439 + CDS Nonsynonymous[Ser306Gly]
1008 .. 1008 G/T rs2240700 + CDS Synonymous[Ser336Ser]
1081 .. 1081 C/G rs201697840 + CDS Nonsynonymous[Leu361Val]
1085 .. 1085 C/T rs182092307 + CDS Nonsynonymous[Pro362Leu]
1130 .. 1130 G/A rs186465469 + CDS Nonsynonymous[Gly377Glu]
1182 .. 1182 A/C rs201832611 + CDS Nonsynonymous[Leu394Phe]
1270 .. 1270 G/A rs146481056 + CDS Nonsynonymous[Ala424Thr]
1339 .. 1339 G/A rs141035845 + CDS Nonsynonymous[Asp447Asn]
1358 .. 1358 C/T rs115102808 + CDS Nonsynonymous[Pro453Leu]
1432 .. 1432 G/A rs144796076 + CDS Nonsynonymous[Asp478Asn]
1474 .. 1474 A/C rs199519740 + CDS Nonsynonymous[Thr492Pro]
1476 .. 1476 C/A rs191844335 + CDS Synonymous[Thr492Thr]
1508 .. 1508 C/G rs11575959 + CDS Nonsynonymous[Ser503Trp]
1554 .. 1554 A/G rs201573539 + CDS Synonymous[Gln518Gln]
1556 .. 1556 C/T rs183754735 + CDS Nonsynonymous[Ser519Phe]
1580 .. 1580 A/G rs201461446 + CDS Nonsynonymous[Asp527Gly]
1615 .. 1615 G/A rs199658498 + CDS Nonsynonymous[Asp539Asn]
1637 .. 1637 T/A rs188283892 + CDS Nonsynonymous[Met546Lys]
1751 .. 1751 G/C rs200338108 + CDS Nonsynonymous[Arg584Pro]
1752 .. 1752 T/C rs199836246 + CDS Synonymous[Arg584Arg]
1824 .. 1824 G/C rs201732776 + CDS Synonymous[Leu608Leu]
1890 .. 1890 A/C rs138625114 + CDS Synonymous[Arg630Arg]
1908 .. 1908 T/C rs4912749 + CDS Synonymous[Asp636Asp]
1927 .. 1927 G/A rs148904388 + CDS Nonsynonymous[Val643Met]
1990 .. 1990 G/A rs143444747 + CDS Nonsynonymous[Val664Met]
2011 .. 2011 G/C rs200702899 + CDS Nonsynonymous[Val671Leu]
2023 .. 2023 T/G rs116789057 + CDS Nonsynonymous[Leu675Val]
2281 .. 2281 G/C rs192995605 + CDS Nonsynonymous[Ala761Pro]
2309 .. 2309 T/C rs72790033 + CDS Nonsynonymous[Phe770Ser]
2325 .. 2325 C/T rs147992300 + CDS Synonymous[Tyr775Tyr]
2369 .. 2369 C/T rs143509166 + CDS Nonsynonymous[Ser790Phe]
2397 .. 2397 A/G rs200048432 + CDS Synonymous[Glu799Glu]
2461 .. 2461 G/A rs201391904 + CDS Nonsynonymous[Ala821Thr]
2473 .. 2473 G/A rs200418116 + CDS Nonsynonymous[Gly825Ser]
2529 .. 2529 T/C rs149352680 + CDS Synonymous[Phe843Phe]
2628 .. 2628 C/T rs143630962 + CDS Synonymous[Ser876Ser]
2629 .. 2629 G/A rs114669158 + CDS Nonsynonymous[Ala877Thr]
2632 .. 2632 C/T rs148119281 + CDS Nonsynonymous[Arg878Cys]
2637 .. 2637 C/T rs141873183 + CDS Synonymous[Tyr879Tyr]
2640 .. 2640 A/G rs2233612 + CDS Synonymous[Gly880Gly]
2662 .. 2662 G/A rs116366286 + CDS Nonsynonymous[Val888Met]
2675 .. 2675 G/A rs61749029 + CDS Nonsynonymous[Arg892His]
2702 .. 2702 A/G rs201009079 + CDS Nonsynonymous[Asn901Ser]
2718 .. 2718 C/T rs143362044 + CDS Synonymous[Asn906Asn]
2761 .. 2761 G/A rs200541479 + CDS Nonsynonymous[Gly921Ser]
2777 .. 2777 C/T rs202071188 + CDS Nonsynonymous[Ser926Leu]
2796 .. 2796 G/A rs147534370 + CDS Synonymous[Lys932Lys]
2828 .. 2828 C/T rs201024828 + 3'UTR
2829 .. 2829 G/A rs2233613 + 3'UTR
2934 .. 2934 G/A rs76613492 + 3'UTR
2990 .. 2990 T/C rs115159796 + 3'UTR
3000 .. 3000 C/A rs191106767 + 3'UTR
3236 .. 3236 C/A rs146235929 + 3'UTR
3254 .. 3254 G/C rs4912608 + 3'UTR
3329 .. 3329 T/G rs148447880 + 3'UTR
3491 .. 3491 G/A rs142624814 + 3'UTR
3512 .. 3512 T/C rs113814137 + 3'UTR
3518 .. 3518 C/T rs150999050 + 3'UTR
3525 .. 3525 T/G rs187622252 + 3'UTR
3714 .. 3714 A/G rs192947391 + 3'UTR
3797 .. 3797 T/C rs140884268 + 3'UTR
3820 .. 3820 G/A rs111365449 + 3'UTR
4011 .. 4011 A/G rs78180647 + 3'UTR
4079 .. 4079 G/A rs185198109 + 3'UTR
4172 .. 4172 C/T rs147780926 + 3'UTR
4465 .. 4465 C/T rs141207714 + 3'UTR
4484 .. 4484 G/T rs189734474 + 3'UTR
4540 .. 4540 C/T rs112402554 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
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 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer