H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000071761 Accession number: AF152335 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protocadherin gamma-B6; PCDH-gamma-B6; Precursor;
 
 

Motif information
ORF

length(930),orf(1:2793)
MGGSCAQRRRAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNL
AKDLGLSVLDVSARKLRVSAEKLHFSVDAESGDLLVKNRIDREQICKERR
RCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFDKKEIHLEIFESASAGT
RLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPELSLEKLL
DREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRIS
LSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGM
IKNNQSFDFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIIT
SLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNN
YYKLVTDGALDREQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAP
VFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVASDLEPLA
VSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRV
LVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGH
NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGG
QPPLSATATLHLVFADNLQEILPDLSDRPVLSDPQAELQFYLVVALALIS
VLFLLAVILAIALRLRRSLSPATWDCFHPGLCVKSGPVVPPNYSEGTLPY
SYNLCIAHTGTKEFNFLKCSVPLHSNEDMVCSVSPGALIPPHGGEDLTSH
PETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA
TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK*
a.a.
length
InterPro Name
length(98), motif(28:125) 98 IPR015919 Cadherin-like [Domain]
length(94), motif(31:124) 94 IPR002126 Cadherin [Domain]
length(81), motif(32:112) 81 IPR013164 Cadherin, N-terminal [Domain]
length(76), motif(56:131) 76 IPR002126 Cadherin [Domain]
length(20), motif(73:92) 20 IPR002126 Cadherin [Domain]
length(59), motif(75:133) 59 IPR002126 Cadherin [Domain]
length(11), motif(121:131) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(115), motif(125:239) 115 IPR002126 Cadherin [Domain]
length(108), motif(127:234) 108 IPR015919 Cadherin-like [Domain]
length(109), motif(134:242) 109 IPR002126 Cadherin [Domain]
length(94), motif(139:232) 94 IPR002126 Cadherin [Domain]
length(86), motif(155:240) 86 IPR002126 Cadherin [Domain]
length(11), motif(230:240) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(121), motif(230:350) 121 IPR015919 Cadherin-like [Domain]
length(108), motif(240:347) 108 IPR002126 Cadherin [Domain]
length(30), motif(242:271) 30 IPR002126 Cadherin [Domain]
length(105), motif(243:347) 105 IPR002126 Cadherin [Domain]
length(92), motif(247:338) 92 IPR002126 Cadherin [Domain]
length(82), motif(264:345) 82 IPR002126 Cadherin [Domain]
length(13), motif(314:326) 13 IPR002126 Cadherin [Domain]
length(11), motif(335:345) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(104), motif(341:444) 104 IPR015919 Cadherin-like [Domain]
length(105), motif(348:452) 105 IPR002126 Cadherin [Domain]
length(95), motif(355:449) 95 IPR002126 Cadherin [Domain]
length(88), motif(355:442) 88 IPR002126 Cadherin [Domain]
length(82), motif(369:450) 82 IPR002126 Cadherin [Domain]
length(20), motif(431:450) 20 IPR002126 Cadherin [Domain]
length(11), motif(440:450) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(123), motif(441:563) 123 IPR015919 Cadherin-like [Domain]
length(113), motif(450:562) 113 IPR002126 Cadherin [Domain]
length(14), motif(450:463) 14 IPR002126 Cadherin [Domain]
length(110), motif(453:562) 110 IPR002126 Cadherin [Domain]
length(96), motif(457:552) 96 IPR002126 Cadherin [Domain]
length(87), motif(474:560) 87 IPR002126 Cadherin [Domain]
length(27), motif(510:536) 27 IPR002126 Cadherin [Domain]
length(18), motif(544:561) 18 IPR002126 Cadherin [Domain]
length(11), motif(550:560) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(108), motif(556:663) 108 IPR015919 Cadherin-like [Domain]
length(88), motif(578:665) 88 IPR002126 Cadherin [Domain]
length(98), motif(578:675) 98 IPR002126 Cadherin [Domain]
length(81), motif(581:661) 81 IPR002126 Cadherin [Domain]
length(82), motif(591:672) 82 IPR002126 Cadherin [Domain]