H-InvDB_9.0 released on May 27, 2015.
Search by
Keyword
H-Inv ID (HIT)
H-Inv cluster ID (HIX)
H-Inv protein ID (HIP)
H-Inv gene family/group (HIF)
Accession number
Chromosome number
Chromosome band
Definition*
Data source ID
---
CCDS ID
dbSNP ID (rs number)
EC number
Ensembl ID
EntrezGene ID
FR ID
FR Accession number
GO ID
GO name*
HGNC gene symbol
HGNC gene name*
InterPro ID
InterPro name*
OMIM ID
OMIM title*
Pathway ID
Pathway name*
RefSeq (gene) ID
RefSeq (protein) ID
SCOP ID
UniProt
for
Advanced Search
Home
Quick guide
Navi
BLAST
Site map
Download
Contact us
Help
H-Invitational ID:
HIT000099460
Accession number:
BC051900
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to Opsin-3; Encephalopsin; Panopsin;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
154 .. 154
G/A
rs141533532
-
CDS
Synonymous[Ala45Ala]
171 .. 171
T/C
rs201734451
-
CDS
Nonsynonymous[Ile51Thr]
192 .. 192
A/G
rs145882594
-
CDS
Nonsynonymous[Asn58Ser]
206 .. 206
C/A
rs137989013
-
CDS
Nonsynonymous[Leu63Ile]
233 .. 233
C/T
rs148814726
-
CDS
Nonsynonymous[Leu72Phe]
244 .. 244
C/T
rs142966339
-
CDS
Synonymous[Pro75Pro]
248 .. 248
C/T
rs149732403
-
CDS
Nonsynonymous[His77Tyr]
259 .. 259
G/C
rs73139034
-
CDS
Synonymous[Leu80Leu]
400 .. 400
G/A
rs201139955
-
CDS
Synonymous[Leu127Leu]
407 .. 407
A/G
rs201882685
-
CDS
Nonsynonymous[Arg130Gly]
467 .. 467
G/A
rs78202695
-
3'UTR
488 .. 488
C/T
rs184456341
-
3'UTR
516 .. 516
G/A
rs200854997
-
3'UTR
526 .. 526
T/C
rs140750839
-
3'UTR
579 .. 579
T/C
rs150590672
-
3'UTR
595 .. 595
A/T
rs200073477
-
3'UTR
599 .. 599
G/A
rs200074626
-
3'UTR
615 .. 615
C/G
rs139764256
-
3'UTR
629 .. 629
C/T
rs142796416
-
3'UTR
649 .. 649
G/A
rs138406816
-
3'UTR
666 .. 666
C/T
rs186335153
-
3'UTR
691 .. 691
G/A
rs180909883
-
3'UTR
714 .. 714
C/T
rs138681461
-
3'UTR
771 .. 771
G/A
rs141477839
-
3'UTR
832 .. 832
A/G
rs1063816
+
3'UTR
849 .. 849
G/A
rs145834329
-
3'UTR
851 .. 851
C/T
rs151169647
-
3'UTR
892 .. 892
A/C
rs147007550
-
3'UTR
916 .. 916
G/C
rs201495076
-
3'UTR
925 .. 925
C/T
rs199779503
-
3'UTR
926 .. 926
G/A
rs185745993
-
3'UTR
931 .. 931
A/T
rs200358884
-
3'UTR
990 .. 990
C/G
rs141487943
-
3'UTR
1089 .. 1089
C/A
rs3765809
-
3'UTR
1164 .. 1164
T/G
rs138931305
-
3'UTR
1227 ^ 1228
-/T
rs201828384
-
3'UTR
1273 .. 1273
G/A
rs113897665
-
3'UTR
1306 .. 1306
G/A
rs114951112
-
3'UTR
1412 .. 1412
C/T
rs182231413
-
3'UTR
1419 .. 1419
C/T
rs115712723
-
3'UTR
1457 .. 1457
G/A
rs12405623
-
3'UTR
1635 .. 1635
C/T
rs12026448
-
3'UTR
1657 .. 1657
T/G
rs61827774
-
3'UTR
1686 .. 1686
T/C
rs144936606
-
3'UTR
1696 .. 1696
A/G
rs189410467
-
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
Type
Start
End
Strand
MER34B
1456
1722
+
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;