H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000192062 Accession number: L11373 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Protocadherin gamma-C3; PCDH-gamma-C3; Protocadherin-2; Protocadherin-43; PC-43; Precursor;
 
 

Motif information
ORF

length(933),orf(115:2916)
MVPEAWRSGLVSTGRVVGVLLLLGALNKASTVIHYEIPEEREKGFAVGNV
VANLGLDLGSLSARRFPVVSGASRRFFEVNRETGEMFVNDRLDREELCGT
LPSCTVTLELVVENPLELFSVEVVIQDINDNNPAFPTQEMKLEISEAVAP
GTRFPLESAHDPDLGSNSLQTYELSRNEYFALRVQTREDSTKYAELVLER
ALDREREPSLQLVLTALDGGTPALSASLPIHIKVLDANDNAPVFNQSLYR
ARVLEDAPSGTRVVQVLATDLDEGPNGEIIYSFGSHNRAGVRQLFALDLV
TGMLTIKGRLDFEDTKLHEIYIQAKDKGANPEGAHCKVLVEVVDVNDNAP
EITVTSVYSPVPEDASGTVIALLSVTDLDAGENGLVTCEVPPGLPFSLTS
SLKNYFTLKTSADLDRETVPEYNLSITARDAGTPSLSALTIVRVQVSDIN
DNPPQSSQSSYDVYIEENNLPGAPILNLSVWDPDAPQNARLSFFLLEQGA
ETGLVGRYFTINRDNGIVSSLVPLDYEDRREFELTAHISDGGTPVLATNI
SVNIFVTDRNDNAPQVLYPRPGGSSVEMLPRGTSAGHLVSRVVGWDADAG
HNAWLSYSLFGSPNQSLFAIGLHTGQISTARPVQDTDSPRQTLTVLIKDN
GEPSLSTTATLTVSVTEDSPEARAEFPSGSAPREQKKNLTFYLLLSLILV
SVGFVVTVFGVIIFKVYKWKQSRDLYRAPVSSLYRTPGPSLHADAVRGGL
MSPHLYHQVYLTTDSRRSDPLLKKPGAASPLASRQNTLRSCDPVFYRQVL
GAESAPPGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG
SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK*
a.a.
length
InterPro Name
length(107), motif(29:135) 107 IPR002126 Cadherin [Domain]
length(91), motif(31:121) 91 IPR015919 Cadherin-like [Domain]
length(96), motif(31:126) 96 IPR002126 Cadherin [Domain]
length(82), motif(33:114) 82 IPR013164 Cadherin, N-terminal [Domain]
length(83), motif(51:133) 83 IPR002126 Cadherin [Domain]
length(20), motif(75:94) 20 IPR002126 Cadherin [Domain]
length(11), motif(123:133) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(115), motif(127:241) 115 IPR002126 Cadherin [Domain]
length(108), motif(129:236) 108 IPR015919 Cadherin-like [Domain]
length(109), motif(136:244) 109 IPR002126 Cadherin [Domain]
length(93), motif(143:235) 93 IPR002126 Cadherin [Domain]
length(86), motif(157:242) 86 IPR002126 Cadherin [Domain]
length(11), motif(232:242) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(133), motif(232:364) 133 IPR015919 Cadherin-like [Domain]
length(107), motif(242:348) 107 IPR002126 Cadherin [Domain]
length(30), motif(244:273) 30 IPR002126 Cadherin [Domain]
length(108), motif(245:352) 108 IPR002126 Cadherin [Domain]
length(94), motif(249:342) 94 IPR002126 Cadherin [Domain]
length(85), motif(266:350) 85 IPR002126 Cadherin [Domain]
length(11), motif(340:350) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(104), motif(345:448) 104 IPR015919 Cadherin-like [Domain]
length(104), motif(349:452) 104 IPR002126 Cadherin [Domain]
length(86), motif(361:446) 86 IPR002126 Cadherin [Domain]
length(90), motif(367:456) 90 IPR002126 Cadherin [Domain]
length(82), motif(373:454) 82 IPR002126 Cadherin [Domain]
length(13), motif(421:433) 13 IPR002126 Cadherin [Domain]
length(20), motif(435:454) 20 IPR002126 Cadherin [Domain]
length(11), motif(444:454) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(127), motif(444:570) 127 IPR015919 Cadherin-like [Domain]
length(111), motif(453:563) 111 IPR002126 Cadherin [Domain]
length(14), motif(454:467) 14 IPR002126 Cadherin [Domain]
length(110), motif(457:566) 110 IPR002126 Cadherin [Domain]
length(97), motif(461:557) 97 IPR002126 Cadherin [Domain]
length(87), motif(478:564) 87 IPR002126 Cadherin [Domain]
length(27), motif(514:540) 27 IPR002126 Cadherin [Domain]
length(18), motif(548:565) 18 IPR002126 Cadherin [Domain]
length(11), motif(554:564) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(107), motif(560:666) 107 IPR015919 Cadherin-like [Domain]
length(104), motif(564:667) 104 IPR002126 Cadherin [Domain]
length(106), motif(579:684) 106 IPR002126 Cadherin [Domain]
length(82), motif(585:666) 82 IPR002126 Cadherin [Domain]
length(80), motif(592:671) 80 IPR002126 Cadherin [Domain]