H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000261801 Accession number: BC065238 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Protein enabled homolog isoform a.
 
 

Transcript original information
Accession number BC065238.1
CAGE tag ID NA
EST ID NA
Clone Number IMAGE:6166022
Experimental resources NBRC: NITE Biological Resource Center  NBRC ; HGPD: Human Gene and Protein Database HGPD ; Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (ENAH) ; Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (ENAH);
Sequence data provider NA
Annotation project NA
Length of cDNA 2286[bp] (No. of exon:13)[A:748 T:479 G:543 C:516]
Devision HUM
Molecular type mRNA
Library origin Cell type NA
Tissue type Skin, melanotic melanoma.
Develpmental stage NA
Mini-G
Sequence quality information
CDS feature N-truncated
Kozak sequence NA
PolyA Site: 2272(+) Signal: 2244-2248(+)
Vector/adapter sequence NA
Frame shift NA
Remaining intron NA
Splice site acceptor (NAGNAG) TAGGAG; 
Transcript quality feature Truncation; 
Notes NA

Gene structure information  G-integra H-DBAS cDNA-genome alignment
H-Inv cluster ID HIX0001634
Genomic location  G-integra Help Chromosome 1
Location 1q42.12
Position 225684789- 225754992
Strand -
Possible duplicated location(s) NA
Gene structure 13 exon(s)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:55740
KEGG GENES KEGG GENES(55740)
GeneCard GeneCardENAH*GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA-genome alignmentcDNA-genome alignment

Predicted CDS information
HIP ID HIP000118283
Predicted CDS 1..1584;  527[aa];  Orientation:+1; 
Codon Adaptation Index (CAI). 0.743

Motif information
ORF

length(527),orf(1:1584)
NTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGS
KEDANVFASAMMHALEVLNSQETGPTLPRQNSQLPAQVQNGPSQEELEIQ
RRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLER
ERQERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQ
ERERQEQLEREQLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQA
ASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLP
STGPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFFLASMSEDNRPLTGLA
AAIAGAKLRKVSRMEDTSFPSGGNAIGVNSASSKTDTGRGNGPLPLGGSG
LMEEMSALLARRRRIAEKGSTIETEQKEDKGEDSEPVTSKASSTSTPEPT
RKPWERTNTMNGSKSPVISRPKSTPLSQPSANGVQTEGLDYDRLKQDILD
EMRKELTKLKEELIDAIRQELSKSNTA*
a.a.
length
InterPro Name
length(71), motif(1:71) 71 IPR011993 Pleckstrin homology-like domain [Domain]
length(68), motif(1:68) 68 IPR000697 WH1/EVH1 domain [Domain]
length(64), motif(1:64) 64 IPR000697 WH1/EVH1 domain [Domain]
length(40), motif(487:526) 40 IPR014885 VASP tetramerisation [Domain]

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000261801
H-Inv cluster ID Locus viewHIX0001634
Accession number BC065238.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO; 
Coding potential  Help Protein coding; 
Definition Similar to Protein enabled homolog isoform a.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001008493)  [Identity/coverage = 100.0%/92.72%] to Homo sapiens protein.
Experimental evidence Protein evidence
PubMed ID NA
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol ENAH
HGNC aliases NA
HGNC name enabled homolog (Drosophila)
DDBJ ENAH
UniProt NA
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000118283
No. of interaction 19
Interaction partner(s) HIP000025343HIP000036762HIP000044569HIP000054668HIP000056827HIP000075209HIP000076468HIP000078908HIP000090580HIP000101738HIP000102727HIP000103628HIP000123963HIP000129552HIP000172266HIP000176774HIP000256266HIP000257878HIP000349910
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:55740
KEGG GENES KEGG GENES(55740)
GeneCard GeneCardENAH*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool;  TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA


Subcellular localization information  Last modified:27-May-2015
WoLF PSORT mitochondria;  cytosol;  peroxisome;  Other; 
Target P Not predicted
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Gene expression information  H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA250219;  AGhsB130401;  AGhsB200916; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 228553_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 228553_at; 
HG-U133_Plus_2 1553672_at;  228553_at; 
HG-U95 44597_at;  75549_at;  81075_at; 
HG-U95A NA
HG-U95B 44597_at; 
HG-U95C NA
HG-U95D 75549_at; 
HG-U95E 81075_at; 
HG-U95Av2 NA
HuEx-1_0 2382857;  2458364;  2458365;  2458367;  2458371;  2458372;  2458378;  2458380;  2458381;  2458382;  2458383;  2458384;  2458385;  2458386;  2458389;  2458390;  2458397;  2458398;  2458399;  2458400;  2458401;  2458406;  2458416;  2657925; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P337767; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P337767; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
164 .. 164 A/G rs141332414 - CDS Nonsynonymous[Asn55Ser]
189 .. 189 T/C rs146464464 - CDS Synonymous[His63His]
273 .. 273 C/T rs139065275 - CDS Synonymous[Gly91Gly]
300 .. 300 A/G rs148691501 - CDS Synonymous[Gln100Gln]
337 .. 337 C/A rs201023360 - CDS Nonsynonymous[Leu113Met]
344 .. 344 G/A rs143642798 - CDS Nonsynonymous[Arg115Gln]
504 .. 504 G/A rs201432124 - CDS Synonymous[Glu168Glu]
514 .. 514 C/T rs138096201 - CDS Nonsynonymous[Arg172Cys]
515 .. 515 G/A rs149587286 - CDS Nonsynonymous[Arg172His]
522 .. 522 G/A rs140432837 - CDS Synonymous[Glu174Glu]
532 .. 532 C/T rs148381397 - CDS Nonsynonymous[Arg178Cys]
540 .. 540 T/A rs2785204 - CDS Nonsynonymous[Asp180Glu]
541 .. 541 C/T rs141364661 - CDS Nonsynonymous[Arg181Trp]
565 .. 565 C/G rs200650081 - CDS Nonsynonymous[Arg189Gly]
588 .. 588 A/T rs201461224 - CDS Nonsynonymous[Glu196Asp]
589 .. 589 C/T rs142024814 - CDS Nonsynonymous[Arg197Trp]
608 .. 608 A/G rs199518908 - CDS Nonsynonymous[Glu203Gly]
630 .. 630 G/A rs1340868 - CDS Synonymous[Arg210Arg]
647 .. 647 A/G rs201871225 - CDS Nonsynonymous[Glu216Gly]
665 .. 665 C/T rs150540046 - CDS Nonsynonymous[Ser222Leu]
701 .. 701 T/C rs147227325 - CDS Nonsynonymous[Leu234Pro]
761 .. 761 C/T rs147401807 - CDS Nonsynonymous[Pro254Leu]
772 .. 772 C/G rs143810413 - CDS Nonsynonymous[Pro258Ala]
799 .. 799 C/T rs200278281 - CDS Nonsynonymous[Pro267Ser]
809 .. 809 C/T rs149359910 - CDS Nonsynonymous[Pro270Leu]
813 .. 813 A/C rs145188989 - CDS Synonymous[Pro271Pro]
928 .. 928 C/G rs201016572 - CDS Nonsynonymous[Pro310Ala]
1047 .. 1047 T/G rs112734185 - CDS Synonymous[Leu349Leu]
1063 .. 1063 G/A rs143052362 - CDS Nonsynonymous[Gly355Arg]
1064 .. 1064 G/A rs145797306 - CDS Nonsynonymous[Gly355Glu]
1096 .. 1096 G/A rs151173302 - CDS Nonsynonymous[Asp366Asn]
1100 .. 1100 C/A rs149039693 - CDS Nonsynonymous[Thr367Asn]
1127 .. 1127 T/C rs75136619 - CDS Nonsynonymous[Ile376Thr]
1190 .. 1190 G/C rs139773212 - CDS Nonsynonymous[Gly397Ala]
1224 .. 1224 G/C rs147843407 - CDS Synonymous[Leu408Leu]
1256 .. 1256 G/A rs150858944 - CDS Nonsynonymous[Gly419Glu]
1262 .. 1262 C/A rs75986582 - CDS Nonsynonymous[Thr421Lys]
1263 .. 1263 A/G rs141466987 - CDS Synonymous[Thr421Thr]
1274 .. 1274 A/G rs113271908 - CDS Nonsynonymous[Glu425Gly]
1276 .. 1276 C/G rs77211786 - CDS Nonsynonymous[Gln426Glu]
1284 .. 1284 G/A rs146063337 - CDS Synonymous[Glu428Glu]
1345 .. 1345 C/T rs189813142 - CDS Nonsynonymous[Pro449Ser]
1401 .. 1401 T/A rs143799748 - CDS Synonymous[Val467Val]
1403 .. 1403 T/C rs149413176 - CDS Nonsynonymous[Ile468Thr]
1457 .. 1457 C/T rs141150172 - CDS Nonsynonymous[Thr486Met]
1525 .. 1525 C/T rs11556772 + CDS Synonymous[Leu509Leu]
1527 .. 1527 A/C rs144474730 - CDS Synonymous[Leu509Leu]
1544 .. 1544 A/G rs113170551 - CDS Nonsynonymous[Asp515Gly]
1579 .. 1579 G/A rs114476062 - CDS Nonsynonymous[Ala527Thr]
1588 .. 1588 A/G rs17501138 - 3'UTR
1607 .. 1607 G/T rs184878811 - 3'UTR
1758 .. 1758 T/A rs149348028 - 3'UTR
1806 .. 1806 A/T rs1054019 + 3'UTR
1825 .. 1825 T/C rs192876284 - 3'UTR
1886 .. 1886 G/A rs188405610 - 3'UTR
2070 .. 2070 A/G rs11556773 + 3'UTR
2089 .. 2089 A/G rs74147001 - 3'UTR
2191 .. 2191 A/G rs17560215 - 3'UTR
2241 .. 2241 T/A rs184404375 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer