H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
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H-Invitational ID:
HIT000265606
Accession number:
BC075791
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Homeobox protein Hox-A13; Homeobox protein Hox-1J;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
9 .. 9
C/T
rs200152660
-
5'UTR
15 .. 15
C/T
rs200700938
-
5'UTR
75 .. 75
G/A
rs200676634
-
CDS
Nonsynonymous[Val16Ile]
176 .. 176
G/A
rs35042646
+
CDS
Synonymous[Ala49Ala]
450 ^ 451
-/AGGCGGGCC
rs35599078
+
CDS
525 .. 525
C/A
rs34398255
+
CDS
Nonsynonymous[Pro166Thr]
533 .. 533
G/A
rs34185333
+
CDS
Synonymous[Ala168Ala]
626 .. 626
G/T/A
rs35255035
-
CDS
662 .. 662
G/T
rs35277569
+
CDS
Nonsynonymous[Met211Ile]
670 .. 670
C/A
rs150062376
-
CDS
Nonsynonymous[Ala214Asp]
691 .. 691
T/A
rs139336802
-
CDS
Nonsynonymous[Phe221Tyr]
697 .. 697
C/G
rs41311757
-
CDS
Nonsynonymous[Ser223Cys]
702 .. 702
G/C
rs151310409
-
CDS
Nonsynonymous[Ala225Pro]
713 .. 713
C/T
rs201761598
-
CDS
Synonymous[Phe228Phe]
716 .. 716
C/G
rs1065462
+
CDS
Synonymous[Ala229Ala]
813 .. 813
G/A
rs61737504
-
CDS
Nonsynonymous[Gly262Ser]
846 .. 846
A/G
rs139880902
-
CDS
Nonsynonymous[Met273Val]
888 .. 888
G/A
rs145935388
-
CDS
Nonsynonymous[Gly287Ser]
915 .. 915
G/C
rs199871426
-
CDS
Nonsynonymous[Ala296Pro]
926 .. 926
C/T
rs183941484
-
CDS
Synonymous[Pro299Pro]
944 .. 944
T/G
rs200379258
-
CDS
Synonymous[Thr305Thr]
953 .. 953
C/A
rs142315866
-
CDS
Nonsynonymous[Asp308Glu]
957 .. 957
G/A
rs112749872
-
CDS
Nonsynonymous[Val310Ile]
979 .. 979
G/C
rs139120665
-
CDS
Nonsynonymous[Ser317Thr]
982 .. 982
C/G
rs146259736
-
CDS
Nonsynonymous[Ser318Cys]
991 .. 991
G/A
rs76529896
-
CDS
Nonsynonymous[Arg321Lys]
994 ^ 995
-/G
rs11386833
-
CDS
1031 .. 1031
A/G
rs35608915
+
CDS
Synonymous[Leu334Leu]
1052 .. 1052
C/T
rs138584447
-
CDS
Synonymous[Tyr341Tyr]
1105 .. 1105
C/T
rs149615551
-
CDS
Nonsynonymous[Thr359Met]
1136 .. 1136
G/A
rs104894019
+
CDS
AA-STOP[Trp369*]
1143 .. 1143
A/C
rs121912542
+
CDS
Nonsynonymous[Asn372His]
1170 ^ 1171
-/G
rs66586358
-
CDS
1246 .. 1246
C/T
rs199530619
-
3'UTR
1247 .. 1247
G/A
rs138250182
-
3'UTR
1309 .. 1309
A/C
rs41303372
-
3'UTR
1343 .. 1343
A/T
rs17472448
-
3'UTR
1504 .. 1504
T/G
rs181575995
-
3'UTR
1560 .. 1560
G/A
rs2189239
-
3'UTR
1707 .. 1707
A/G
rs143288289
-
3'UTR
1972 .. 1972
A/G
rs189176903
-
3'UTR
2055 .. 2055
A/G
rs757181
-
3'UTR
2143 .. 2143
T/C
rs112139316
-
3'UTR
2168 .. 2168
G/A
rs145750950
-
3'UTR
2186 ^ 2187
-/C
rs35379558
-
3'UTR
2194 .. 2194
T/C
rs185640292
-
3'UTR
2294 .. 2294
T/A
rs142106798
-
3'UTR
2353 .. 2353
C/A
rs181330984
-
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
No data available
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;