H-InvDB x AHG DB
Transcript view
H-InvDB_9.0 released on May 27, 2015.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
H-Invitational ID: HIT000267543 Accession number: CR456609 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Immunoglobulin iota chain; CD179 antigen-like family member A; Protein VPreB1; V(pre)B protein; VpreB protein; AltName: CD_antigen=CD179a; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
1 .. 1 A/G rs11089977 + 5'UTR
2 .. 2 T/C rs11089978 + 5'UTR
24 .. 24 C/G rs146019843 + CDS Nonsynonymous[Pro5Ala]
78 .. 78 C/G rs201722357 + CDS Nonsynonymous[Leu23Val]
80 .. 80 G/A rs9619852 + CDS Synonymous[Leu23Leu]
91 .. 91 C/T rs142180774 + CDS Nonsynonymous[Pro27Leu]
96 .. 96 A/G rs151193387 + CDS Nonsynonymous[Met29Val]
100 .. 100 C/T rs199900999 + CDS Nonsynonymous[Ser30Phe]
104 .. 104 G/A rs201207008 + CDS Synonymous[Ser31Ser]
124 .. 124 G/A rs139951133 + CDS Nonsynonymous[Arg38His]
158 .. 158 C/T rs200837518 + CDS Synonymous[Ile49Ile]
237 .. 237 G/A rs1320 + CDS Nonsynonymous[Asp76Asn]
241 .. 241 A/G rs147568280 + CDS Nonsynonymous[Lys77Arg]
249 .. 249 G/A rs62640870 + CDS Nonsynonymous[Gly80Ser]
250 .. 250 G/A rs144188550 + CDS Nonsynonymous[Gly80Asp]
260 .. 260 C/G rs145423292 + CDS Synonymous[Val83Val]
268 .. 268 G/A rs149218137 + CDS Nonsynonymous[Arg86His]
285 .. 285 G/A rs200057782 + CDS Nonsynonymous[Asp92Asn]
302 .. 302 G/C rs188917401 + CDS Nonsynonymous[Arg97Ser]
307 .. 307 A/T rs143361893 + CDS Nonsynonymous[Tyr99Phe]
316 .. 316 T/A rs201276189 + CDS Nonsynonymous[Ile102Asn]
320 .. 320 T/C rs148339904 + CDS Synonymous[Ser103Ser]
327 .. 327 C/T rs17851581 + CDS AA-STOP[Gln106*]
347 .. 347 G/A rs140610553 + CDS Nonsynonymous[Met112Ile]
366 .. 366 G/T rs111340500 + CDS Nonsynonymous[Ala119Ser]
369 .. 369 C/T rs201713481 + CDS Nonsynonymous[Arg120Cys]
370 .. 370 G/A rs200943449 + CDS Nonsynonymous[Arg120His]
374 .. 374 C/T rs5995719 + CDS Synonymous[Ser121Ser]
376 .. 376 C/T rs11089979 + CDS Nonsynonymous[Ser122Leu]
405 .. 405 G/A rs5995720 + CDS Nonsynonymous[Glu132Lys]
414 .. 414 A/G rs200309974 + CDS Nonsynonymous[Met135Val]
448 .. 448 G/A rs62640867 + CDS Synonymous_atSTOP[*146*]
464 .. 464 A/G rs6001563 + 3'UTR
475 .. 475 C/T rs185445944 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene;  Repeat mask viewerRepeat Mask Viewer