H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID:
HIT000321738
Accession number:
X52221
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to TFIIH basal transcription factor complex helicase XPD subunit; EC=3.6.4.12; Basic transcription factor 2 80 kDa subunit; BTF2 p80; CXPD; DNA excision repair protein ERCC-2; DNA repair protein complementing XP-D cells; TFIIH basal transcription factor complex 80 kDa subunit; TFIIH 80 kDa subunit; TFIIH p80; Xeroderma pigmentosum group D-complementing protein;
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Nucleotide sequence fasta
Protein sequence fasta
Predicted CDS information
HIP ID
HIP000091376
Predicted CDS
754..2872; 706[aa]; Orientation:+1;
Codon Adaptation Index (CAI).
0.856
MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCS RTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPL RFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGI YNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKE LARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIK ETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIR TAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRF CAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDR TPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH PVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLL LEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDG AETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVP YVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDY GLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQM AQPFHR