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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000321841 Accession number: X53586 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Integrin alpha-6; CD49 antigen-like family member F; VLA-6; AltName: CD_antigen=CD49f; Contains: Integrin alpha-6 heavy chain; Contains: Integrin alpha-6 light chain; Precursor;
 
 

Transcript original information
Accession number X53586.1
CAGE tag ID NA
EST ID NA
Clone Number 26.44, 26.1-7
Experimental resources NBRC: NITE Biological Resource Center  NBRC ; HGPD: Human Gene and Protein Database HGPD ;
Sequence data provider NA
Annotation project NA
Length of cDNA 5629[bp] (No. of exon:26)[A:1666 T:1582 G:1284 C:1097]
Devision HUM
Molecular type mRNA
Library origin Cell type carcinoma
Tissue type pancreas
Develpmental stage NA
Mini-G
Sequence quality information
CDS feature Complete CDS
Kozak sequence NA
PolyA NA
Vector/adapter sequence NA
Frame shift NA
Remaining intron NA
Splice site acceptor (NAGNAG) CAGGAG; 
Transcript quality feature NA
Notes NA

Gene structure information  G-integra H-DBAS cDNA-genome alignment
H-Inv cluster ID HIX0023932
Genomic location  G-integra Help Chromosome 2
Location 2q31.1
Position 173292370- 173371010
Strand +
Possible duplicated location(s) NA
Gene structure 26 exon(s)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:3655
KEGG GENES KEGG GENES(3655)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA-genome alignmentcDNA-genome alignment

Predicted CDS information
HIP ID HIP000021507
Predicted CDS 147..3368;  1073[aa];  Orientation:+3; 
Codon Adaptation Index (CAI). 0.717

Motif information
ORF

length(1073),orf(147:3368)
MAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAM
HWQLQPEDKRLLLVGAPRGEALPLQRANRTGGLYSCDITARGPCTRIEFD
NDADPTSESKEDQWMGVTVQSQGPGGKVVTCAHRYEKRQHVNTKQESRDI
FGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFTKDF
HYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVGGETEHDESLV
PVPANSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAH
LLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGA
VYVYMNQQGRWNNVKPIRLNGTKDSMFGIAVKNIGDINQDGYPDIAVGAP
YDDLGKVFIYHGSANGINTKPTQVLKGISPYFGYSIAGNMDLDRNSYPDV
AVGSLSDSVTIFRSRPVINIQKTITVTPNRIDLRQKTACGAPSGICLQVK
SCFEYTANPAGYNPSISIVGTLEAEKERRKSGLSSRVQFRNQGSEPKYTQ
ELTLKRQKQKVCMEETLWLQDNIRDKLRPIPITASVEIQEPSSRRRVNSL
PEVLPILNSDEPKTAHIDVHFLKEGCGDDNVCNSNLKLEYKFCTREGNQD
KFSYLPIQKGVPELVLKDQKDIALEITVTNSPSNPRNPTKDGDDAHEAKL
IATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADCELGNPFKRNSNVT
FYLVLSTTEVTFDTPYLDINLKLETTSNQDNLAPITAKAKVVIELLLSVS
GVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFRVINLGKPLTNLGTAT
LNIQWPKEISNGKWLLYLVKVESKGLEKVTCEPQKEINSLNLTESHNSRK
KREITEKQIDDNRKFSLFAERKYQTLNCSVNVNCVNIRCPLRGLDSKASL
ILRSRLWNSTFLEEYSKLNYLDILMRAFIDVTAAAENIRLPNAGTQVRVT
...
a.a.
length
InterPro Name
length(66), motif(30:95) 66 IPR013519 Integrin alpha beta-propellor [Repeat]
length(62), motif(40:101) 62 IPR013519 Integrin alpha beta-propellor [Repeat]
length(66), motif(101:166) 66 IPR013519 Integrin alpha beta-propellor [Repeat]
length(54), motif(176:229) 54 IPR013519 Integrin alpha beta-propellor [Repeat]
length(57), motif(244:300) 57 IPR013519 Integrin alpha beta-propellor [Repeat]
length(50), motif(254:303) 50 IPR013519 Integrin alpha beta-propellor [Repeat]
length(13), motif(255:267) 13 IPR000413 Integrin alpha chain [Family]
length(12), motif(275:286) 12 IPR000413 Integrin alpha chain [Family]
length(63), motif(301:363) 63 IPR013519 Integrin alpha beta-propellor [Repeat]
length(21), motif(309:329) 21 IPR000413 Integrin alpha chain [Family]
length(57), motif(312:368) 57 IPR013519 Integrin alpha beta-propellor [Repeat]
length(56), motif(364:419) 56 IPR013519 Integrin alpha beta-propellor [Repeat]
length(54), motif(373:426) 54 IPR013519 Integrin alpha beta-propellor [Repeat]
length(25), motif(376:400) 25 IPR000413 Integrin alpha chain [Family]
length(60), motif(420:479) 60 IPR013519 Integrin alpha beta-propellor [Repeat]
length(56), motif(428:483) 56 IPR013519 Integrin alpha beta-propellor [Repeat]
length(22), motif(432:453) 22 IPR000413 Integrin alpha chain [Family]
length(20), motif(458:477) 20 IPR000413 Integrin alpha chain [Family]
length(476), motif(464:939) 476 IPR013649 Integrin alpha-2 [Domain]
length(14), motif(575:588) 14 IPR000413 Integrin alpha chain [Family]
length(20), motif(1025:1044) 20 IPR000413 Integrin alpha chain [Family]
length(8), motif(1037:1044) 8 IPR018184 Integrin alpha chain, C-terminal cytoplasmic region, conserved site [Conserved_site]
length(14), motif(1038:1051) 14 IPR018184 Integrin alpha chain, C-terminal cytoplasmic region, conserved site [Conserved_site]

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000321841
H-Inv cluster ID Locus viewHIX0023932
Accession number X53586.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Coding potential  Help Protein coding; 
Definition Similar to Integrin alpha-6; CD49 antigen-like family member F; VLA-6; AltName: CD_antigen=CD49f; Contains: Integrin alpha-6 heavy chain; Contains: Integrin alpha-6 light chain; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P23229)  [Identity/coverage = 99.725%/100.0%] to Homo sapiens (Human). protein.
Experimental evidence Protein evidence
PubMed ID 14767311946438195364019766382070796254202226495037583007768143482538148360143849619014702039154893341581562116263699167549601915921821269460ALL
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
DDBJ NA
UniProt ITGA6
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000021507
No. of interaction 12
Interaction partner(s) HIP000029097HIP000029955HIP000029955HIP000068941HIP000070198HIP000080650HIP000102365HIP000102365HIP000166291HIP000166291HIP000169506HIP000169506
BIND 24515;  24516;  24801; 
DIP NA
MINT NA
HPRD 00150;  00223;  00252;  00628;  00946;  01038;  01121;  01430;  01501;  03150;  03180;  03763;  04091;  05462;  08985;  09004; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:3655
KEGG GENES KEGG GENES(3655)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Human curated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA

Gene ontology information
Biological process cell adhesion (GO:0007155); 
Cellular component integrin complex (GO:0008305); 

Subcellular localization information  Last modified:27-May-2015
WoLF PSORT peroxisome;  cytosol;  plasma membrane;  Other; 
Target P signal peptide
SOSUI membrane protein
TMHMM membrane protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Protein structure information (GTOP) GTOP Last modified:27-May-2015
Start End PDB_ID E-value Identity Coverage SCOP_ID
26 465 1jv2A4 5e-68 31.6 414/438 b.69.8.1
466 628 1jv2A1 8e-34 25.3 154/160 b.1.15.1
629 786 1jv2A2 1e-21 21.4 131/100 b.1.15.1
793 1004 1jv2A3 6e-38 25.3 182/190 b.1.15.1
Related H-InvDB links GTOP GTOP

Gene expression information  H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA240511;  AGhsB140306; 
Affymetrix
GeneChip
HG-Focus 201656_at; 
HG-U133 201656_at;  215177_s_at;  229643_at; 
HG-U133A 201656_at;  215177_s_at; 
HG-U133A_2 201656_at;  215177_s_at; 
HG-U133B 229643_at; 
HG-U133_Plus_2 201656_at;  215177_s_at;  229643_at; 
HG-U95 2077_at;  33410_at;  33411_g_at;  41266_at;  64003_at;  67243_at;  78871_at; 
HG-U95A 2077_at;  33410_at;  33411_g_at;  41266_at; 
HG-U95B NA
HG-U95C 64003_at; 
HG-U95D NA
HG-U95E 67243_at;  78871_at; 
HG-U95Av2 NA
HuEx-1_0 2515628;  2515629;  2515643;  2515645;  2515646;  2515650;  2515654;  2515655;  2515656;  2515657;  2515658;  2515659;  2515661;  2515662;  2515663;  2515664;  2515665;  2515666;  2515667;  2515668;  2515669;  2515670;  2515673;  2515674;  2515675;  2515677;  2515679;  2515683;  2515685;  2515686;  2515687;  2587162;  2587163;  2587188;  2587193;  2587201;  2587205;  2587206; 
HuGeneFL X53586_rna1_at; 
Agilent Human 1A Oligo Microarray:PGID215 A_23_P210176; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P210176; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:27-May-2015
Disease relation Disease name: Epidermolysis bullosa, junctional, with pyloric stenosis (226730); 
Related information in OMIM OMIM ID:  147556;  Title: INTEGRIN, ALPHA-6
Co-localized orphan diseases NA
Disease related mutation MutationView:  147556
JRE-1.4.0 or later is required.Download JRE at Sun's web site.
Literature-Extracted GENe-Disease Associations (LEGENDA) LEGENDA Gene name Entrez Gene ID:(3655)
Disease Entrez Gene ID:(3655)
Substance Entrez Gene ID:(3655)
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA

Evolutionary information  Evola Help Last modified:27-May-2015
Relationship Species Accession number MGI Links
Orthology Danio sp. (Zebrafish) BC090458 G-integraG-integra
Orthology Equus sp. (Horse) ENSECAT00000006140 G-integraG-integra
Orthology Mus sp. (Mouse) ENSMUST00000028522 G-integraG-integra
Orthology Oryzias sp. (Medaka) ENSORLT00000018009 G-integraG-integra
Orthology Oryzias sp. (Medaka) ENSORLT00000021756 G-integraG-integra
Orthology Pongo sp. (Orangutan) ENSPPYT00000015026 G-integraG-integra
Orthology Tetraodon sp. (Tetraodon) GSTENT00020949001 G-integraG-integra
Orthology Tetraodon sp. (Tetraodon) GSTENT00029239001 G-integraG-integra
Orthology Tetraodon sp. (Tetraodon) GSTENT00031433001 G-integraG-integra
Orthology Bos sp. (Cow) NM_001109981 G-integraG-integra
Orthology Takifugu sp. (Fugu) SINFRUT00000180156 G-integraG-integra
Orthology Takifugu sp. (Fugu) SINFRUT00000180745 G-integraG-integra
Orthology Gallus sp. (Chicken) X56559 G-integraG-integra
Orthology Rattus sp. (Rat) XM_001059408 G-integraG-integra
Orthology Monodelphis sp. (Opossum) XM_001368083 G-integraG-integra
Orthology Danio sp. (Zebrafish) XM_001922966 G-integraG-integra
Orthology Pan sp. (Chimpanzee) XM_515909 G-integraG-integra
Orthology Canis sp. (Dog) XM_855851 G-integraG-integra
Phylogenetic tree [View by ATV]
Neighbor-joining (phb) 
Related H-InvDB links EvolaEvoladN/dS (under constraction); 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
9 .. 9 G/A rs144682022 + 5'UTR
68 .. 68 C/T rs148497864 + 5'UTR
133 .. 133 C/G rs144341070 + 5'UTR
145 .. 145 C/T rs201956085 + 5'UTR
156 .. 156 G/A rs201418157 + CDS Nonsynonymous[Ala4Thr]
158 .. 158 C/G rs201026395 + CDS Synonymous[Ala4Ala]
165 .. 165 C/T rs76775089 + CDS Synonymous[Leu7Leu]
201 .. 201 C/T rs150472149 + CDS Nonsynonymous[Arg19Trp]
206 .. 206 C/T rs140763977 + CDS Synonymous[Leu20Leu]
294 .. 294 A/G rs138572695 + CDS Nonsynonymous[Met50Val]
347 .. 347 G/A rs143545213 + CDS Synonymous[Pro67Pro]
348 .. 348 C/T rs188528648 + CDS Nonsynonymous[Arg68Cys]
386 .. 386 G/A rs200193154 + CDS Synonymous[Thr80Thr]
404 .. 404 C/T rs200919733 + CDS Synonymous[Cys86Cys]
418 .. 418 G/A rs200823590 + CDS Nonsynonymous[Arg91Gln]
458 .. 458 C/T rs141735531 + CDS Synonymous[Asp104Asp]
574 .. 574 C/T rs199977185 + CDS Nonsynonymous[Thr143Met]
575 .. 575 G/A rs140628012 + CDS Synonymous[Thr143Thr]
612 .. 612 G/A rs200944396 + CDS Nonsynonymous[Val156Ile]
664 .. 664 G/C rs147253357 + CDS Nonsynonymous[Ser173Thr]
905 .. 905 T/G rs200561616 + CDS Synonymous[Pro253Pro]
1068 .. 1068 G/A rs145641588 + CDS Nonsynonymous[Asp308Asn]
1078 .. 1078 G/A rs149809522 + CDS Nonsynonymous[Gly311Asp]
1106 ^ 1107 -/GGGGGGG rs150613003 + CDS
1114 .. 1114 T/A rs148547864 + CDS Nonsynonymous[Val323Glu]
1144 .. 1144 T/C rs200187345 + CDS Nonsynonymous[Ile333Thr]
1194 .. 1194 G/T rs201037158 + CDS Nonsynonymous[Ala350Ser]
1197 .. 1197 G/C rs146630825 + CDS Nonsynonymous[Val351Leu]
1245 .. 1245 A/G rs201246910 + CDS Nonsynonymous[Ile367Val]
1284 .. 1284 G/A rs11895564 + CDS Nonsynonymous[Ala380Thr]
1304 .. 1304 T/C rs150310434 + CDS Synonymous[Asp386Asp]
1348 .. 1348 A/G rs200217971 + CDS Nonsynonymous[Tyr401Cys]
1363 .. 1363 A/G rs149501876 + CDS Nonsynonymous[Lys406Arg]
1437 .. 1437 T/C rs1130988 + CDS Nonsynonymous[Tyr431His]
1520 .. 1520 A/G rs138908657 + CDS Synonymous[Ser458Ser]
1578 .. 1578 C/T rs147243269 + CDS Nonsynonymous[Pro478Ser]
1593 .. 1593 C/T rs201826336 + CDS Nonsynonymous[Leu483Phe]
1597 .. 1597 G/A rs200082047 + CDS Nonsynonymous[Arg484His]
1625 .. 1625 T/A rs141416496 + CDS Nonsynonymous[Ser493Arg]
1634 .. 1634 C/G rs200560853 + CDS Nonsynonymous[Cys496Trp]
1663 .. 1663 C/T rs139324320 + CDS Nonsynonymous[Thr506Ile]
1890 .. 1890 A/G rs16860530 + CDS Nonsynonymous[Ile582Val]
1898 .. 1898 C/T rs143857602 + CDS Synonymous[Ala584Ala]
1946 .. 1946 T/C rs113598978 + CDS Synonymous[Leu600Leu]
1996 .. 1996 T/C rs148815652 + CDS Nonsynonymous[Ile617Thr]
2080 .. 2080 G/A rs190444302 + CDS Nonsynonymous[Arg645Gln]
2089 .. 2089 A/C rs200970506 + CDS Nonsynonymous[Asn648Thr]
2114 .. 2114 A/G rs191117279 + CDS Synonymous[Pro656Pro]
2142 .. 2142 C/T rs201384421 + CDS Synonymous[Leu666Leu]
2169 .. 2169 G/A rs13002726 + CDS Nonsynonymous[Glu675Lys]
2219 .. 2219 T/C rs113927986 + CDS Synonymous[Asp691Asp]
2222 .. 2222 C/T rs150954056 + CDS Synonymous[Gly692Gly]
2228 .. 2228 C/T rs2293649 - CDS Synonymous[Asp694Asp]
2255 .. 2255 G/A rs141344340 + CDS Synonymous[Thr703Thr]
2282 .. 2282 A/T rs2293648 + CDS Synonymous[Ala712Ala]
2309 .. 2309 G/T rs200765179 + CDS Nonsynonymous[Glu721Asp]
2315 .. 2315 G/A rs149917878 + CDS Synonymous[Gln723Gln]
2323 .. 2323 G/A rs142894108 + CDS Nonsynonymous[Cys726Tyr]
2363 .. 2363 C/T rs200285874 + CDS Synonymous[Leu739Leu]
2393 .. 2393 C/G rs61748247 + CDS Synonymous[Val749Val]
2442 .. 2442 T/G rs2737085 + CDS Nonsynonymous[Tyr766Asp]
2471 .. 2471 A/T rs142056561 + CDS Synonymous[Thr775Thr]
2539 .. 2539 C/T rs201430068 + CDS Nonsynonymous[Ser798Leu]
2584 .. 2584 C/G rs144265145 + CDS Nonsynonymous[Thr813Arg]
2677 .. 2677 C/T rs200289610 + CDS Nonsynonymous[Thr844Ile]
2684 .. 2684 C/T rs181814375 + CDS Synonymous[Leu846Leu]
2797 .. 2797 A/G rs61757096 + CDS Nonsynonymous[Gln884Arg]
2807 .. 2807 A/G rs140907663 + CDS Nonsynonymous[Ile887Met]
2850 .. 2850 C/T rs199587983 + CDS Nonsynonymous[Arg902Trp]
2874 .. 2874 G/A rs61737182 + CDS Nonsynonymous[Asp910Asn]
2926 .. 2926 A/G rs111722287 + CDS Nonsynonymous[Asn927Ser]
2934 .. 2934 G/A rs10209072 + CDS Nonsynonymous[Val930Met]
2940 .. 2940 G/T rs201502347 + CDS Nonsynonymous[Val932Leu]
2955 .. 2955 A/G rs190209064 + CDS Nonsynonymous[Ile937Val]
2965 .. 2965 C/T rs138874769 + CDS Nonsynonymous[Pro940Leu]
2966 .. 2966 G/A rs34599583 - CDS Synonymous[Pro940Pro]
3004 .. 3004 G/A rs150695902 + CDS Nonsynonymous[Arg953His]
3008 .. 3008 G/C rs61757097 + CDS Synonymous[Ser954Ser]
3019 .. 3019 A/G rs113510867 + CDS Nonsynonymous[Asn958Ser]
3081 .. 3081 A/C rs201738305 + CDS Nonsynonymous[Ile979Leu]
3120 .. 3120 A/G rs188064664 + CDS Nonsynonymous[Asn992Asp]
3152 .. 3152 T/C rs139596061 + CDS Synonymous[Phe1002Phe]
3249 .. 3249 A/G rs145028778 + CDS Nonsynonymous[Ile1035Val]
3278 .. 3278 A/G rs143159110 + CDS Synonymous[Arg1044Arg]
3368 .. 3368 G/A rs16860616 + CDS Synonymous_atSTOP[*1074*]
3388 .. 3388 T/C rs201192598 + 3'UTR
3426 .. 3426 T/C rs150113724 + 3'UTR
3465 .. 3465 G/A rs200991464 + 3'UTR
3469 .. 3469 G/C rs55707934 + 3'UTR
3502 ^ 3503 -/A rs201055917 + 3'UTR
3515 .. 3515 G/A rs200141585 + 3'UTR
3559 .. 3559 C/T rs201953180 + 3'UTR
3573 .. 3573 A/G/T rs17286988 + 3'UTR
3573 ^ 3574 -/T rs61499296 + 3'UTR
3574 .. 3574 G/A rs76365404 + 3'UTR
3574 ^ 3575 -/AA/AT rs63578461 + 3'UTR
3772 ^ 3773 -/C rs144158353 + 3'UTR
3777 .. 3777 C/T rs114499545 + 3'UTR
3804 .. 3804 G/A rs17664 + 3'UTR
3929 .. 3929 T/G rs202020348 + 3'UTR
3964 .. 3964 C/T rs114005087 + 3'UTR
4071 .. 4071 C/T rs138288164 + 3'UTR
4088 .. 4088 T/C rs143976962 + 3'UTR
4090 .. 4090 G/C rs191934553 + 3'UTR
4120 .. 4120 A/G rs2178473 - 3'UTR
4252 .. 4252 A/C rs147290718 + 3'UTR
4289 .. 4289 A/G rs139374896 + 3'UTR
4357 .. 4357 T/C rs143269892 + 3'UTR
4490 .. 4490 A/T rs182995734 + 3'UTR
4512 .. 4512 T/C rs144685011 + 3'UTR
4572 .. 4572 G/A rs16860635 + 3'UTR
4582 .. 4582 T/C rs188506070 + 3'UTR
4599 .. 4599 C/T rs193228906 + 3'UTR
4600 .. 4600 G/A rs185433853 + 3'UTR
4684 ^ 4685 -/C rs34137567 + 3'UTR
4742 .. 4742 A/G rs148506803 + 3'UTR
4752 .. 4752 T/G rs4132111 + 3'UTR
4794 .. 4794 C/T rs60634699 + 3'UTR
4805 .. 4805 A/T rs200292552 + 3'UTR
4844 .. 4844 G/T rs142884581 + 3'UTR
4905 .. 4905 T/G rs189127895 + 3'UTR
4920 .. 4920 A/C rs1344036 + 3'UTR
5041 .. 5041 G/T rs117775734 + 3'UTR
5091 .. 5091 G/- rs113236519 + 3'UTR
5104 .. 5104 G/A rs6744689 + 3'UTR
5120 .. 5120 T/G rs2357633 - 3'UTR
5123 .. 5123 G/A rs2357632 - 3'UTR
5185 .. 5185 C/G rs150636343 + 3'UTR
5199 .. 5199 T/C rs6759915 + 3'UTR
5280 ^ 5281 -/A rs139972066 + 3'UTR
5281 ^ 5282 -/A rs71744051 + 3'UTR
5323 ^ 5324 -/A rs150850702 + 3'UTR
5330 .. 5330 G/A rs1130975 + 3'UTR
5338 .. 5338 G/A rs1130973 + 3'UTR
5416 .. 5416 T/A rs75595826 + 3'UTR
5473 .. 5473 T/G rs114786166 + 3'UTR
5474 .. 5474 T/C rs191135480 + 3'UTR
5527 .. 5527 A/C rs1130964 + 3'UTR
5557 .. 5557 A/G rs140058200 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer