H-InvDB x AHG DB
Transcript view
H-InvDB_9.0 released on May 27, 2015.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
H-Invitational ID: HIT000321944 Accession number: X54890 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Receptor-type tyrosine-protein phosphatase alpha; Protein-tyrosine phosphatase alpha; R-PTP-alpha; EC=3.1.3.48; Precursor;
 
 

Transcript annotation summary  Locus view Protein view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI viewer VaryGene H-DBAS LEGENDA Gene family TACT
H-Inv ID HIT000321944
H-Inv cluster ID Locus viewHIX0021327
H-Inv protein ID protein viewHIP000043197
Accession number X54890.1
CAGE tag ID NA
EST ID NA
Genomic location  G-integra Help Chromosome 20
Location 20p13
Position 2854349- 3019000
Strand +
Transcript feature  Help NO; 
Coding potential  Help Protein coding; 
Definition Receptor-type tyrosine-protein phosphatase alpha; Protein-tyrosine phosphatase alpha; R-PTP-alpha; EC=3.1.3.48; Precursor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18433)  [Identity/coverage = 98.254%/100.0%] to Homo sapiens (Human). protein.
Gene family / group NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
DDBJ hLRP
UniProt PTPRA
EC number EC 3.1.3.48protein-tyrosine-phosphatase; 
KEGG metabolic pathway 04514 :Cell adhesion molecules (CAMs);  04520 :Adherens junction;  04630 :Jak-STAT signaling pathway;  04660 :T cell receptor signaling pathway;  04662 :B cell receptor signaling pathway;  04670 :Leukocyte transendothelial migration;  04910 :Insulin signaling pathway;  04920 :Adipocytokine signaling pathway;  04940 :Type I diabetes mellitus;  05120 :Epithelial cell signaling in Helicobacter pylori infection; 
PubMed ID 21669452169617217010921720302175890117800521470203915489334170819831797400519369195196903322006823121406692ALL
Related H-InvDB links Similarity Search ToolSimilarity Search Tool
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5786
KEGG GENES KEGG GENES(5786)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Mini-G