H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
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---
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H-Invitational ID:
HIT000395508
Accession number:
EF488978
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to Signal recognition particle 9 kDa protein isoform 2.
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
20 .. 20
G/A
rs3738036
+
5'UTR
75 .. 75
A/G
rs150506040
+
5'UTR
83 .. 83
C/G
rs201121310
+
5'UTR
148 .. 148
C/T
rs200191596
+
CDS
Synonymous[Arg12Arg]
169 .. 169
C/T
rs148080629
+
CDS
Synonymous[Leu19Leu]
205 .. 205
T/C
rs142361213
+
CDS
Synonymous[Tyr31Tyr]
219 .. 219
G/A
rs61849056
+
CDS
Nonsynonymous[Gly36Glu]
229 .. 229
T/C
rs143580849
+
CDS
Synonymous[Cys39Cys]
244 .. 244
T/C
rs138611908
+
CDS
Synonymous[Asp44Asp]
251 .. 251
G/C
rs201380978
+
CDS
Nonsynonymous[Val47Leu]
271 .. 271
A/G
rs1130900
+
CDS
Synonymous[Leu53Leu]
282 .. 282
T/C
rs147346025
+
CDS
Nonsynonymous[Leu57Pro]
304 .. 304
A/G
rs1130901
+
CDS
Nonsynonymous[Ile64Met]
335 .. 335
A/G
rs11555114
+
CDS
Nonsynonymous[Ser75Gly]
340 .. 340
T/G
rs34375224
+
CDS
Synonymous[Gly76Gly]
364 .. 364
A/G
rs11555118
+
3'UTR
471 .. 471
C/T
rs199511703
+
3'UTR
475 .. 475
A/G
rs201568819
+
3'UTR
485 .. 485
G/A
rs149323412
+
3'UTR
521 .. 521
C/T
rs200262058
+
3'UTR
524 .. 524
G/A
rs146544886
+
3'UTR
654 .. 654
C/G
rs188550487
+
3'UTR
670 .. 670
T/C
rs141268331
+
3'UTR
709 .. 709
C/G
rs74604368
-
3'UTR
824 .. 824
A/C
rs11555109
-
3'UTR
944 .. 944
T/C
rs189915800
+
3'UTR
969 .. 969
G/A
rs182555497
+
3'UTR
974 .. 974
C/T
rs11555121
+
3'UTR
1178 .. 1178
T/C
rs11555113
-
3'UTR
1188 .. 1188
G/A
rs145846119
+
3'UTR
1318 .. 1318
C/T
rs186531623
+
3'UTR
1381 .. 1381
T/C
rs191367978
+
3'UTR
1404 .. 1404
C/T
rs1050033
+
3'UTR
1406 .. 1406
A/G
rs184461856
+
3'UTR
1443 .. 1443
G/C
rs14113
+
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
Type
Start
End
Strand
AluJo
254
377
-
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;