H-InvDB_9.0 released on May 27, 2015. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

Home Quick guide Navi BLAST Site map Download Contact us Help

H-Invitational ID: HIT000425216 Accession number: AK292419 Created date: 26-Mar-2013 Last modified: 27-May-2015 Definition: Similar to DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;

		Select format Flat file XML file Nucleotide sequence fasta Protein sequence fasta

Transcript annotation summary

H-Inv ID		HIT000425216
H-Inv cluster ID		HIX0026564
H-Inv protein ID		HIP000242549
Accession number		AK292419.1
CAGE tag ID		NA
EST ID		NA
Genomic location	Chromosome	13
	Location	13q33.3
	Position	108859794- 108867871
	Strand	-
Transcript feature		NO;  Splicing isoform
Coding potential		Protein coding;
Definition		Similar to DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (P49917)  [Identity/coverage = 99.888%/98.13%] to Homo sapiens (Human). protein.
Gene family / group		NA
Gene symbol/name	HGNC symbol	LIG4
	HGNC aliases	NA
	HGNC name	ligase IV, DNA, ATP-dependent
	DDBJ	NA
	UniProt	LIG4
EC number		EC 6.5.1.1DNA ligase (ATP);
KEGG metabolic pathway		NA
PubMed ID		7760816;  8798671;  9259561;  9809069;  10395545;  10854421;  11349135;  11702069;  11779494;  12471202;  12547193;  15057823;  15489334;  16357942;  17396150;  21269460;  ALL;
Related H-InvDB links		Similarity Search Tool
Database links	RefSeq	NA
	Ensembl	NA
	Entrez Gene	Entrez Gene ID:3981;
	KEGG GENES	KEGG GENES(3981);
	GeneCard	LIG4;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Curation status		Auto-annotated
Notes		NA