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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000427932 Accession number: AK309066 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Protransforming growth factor alpha; Contains: Transforming growth factor alpha; TGF-alpha; EGF-like TGF; ETGF; TGF type 1; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
80 .. 80 C/G rs111340736 - 5'UTR
137 .. 137 G/A rs72828676 - 5'UTR
171 .. 171 A/C rs11466190 + 5'UTR
478 .. 478 G/A rs10183171 - CDS Synonymous[Gln27Gln]
490 .. 490 C/G rs200477881 - CDS Nonsynonymous[Asn31Lys]
495 .. 495 C/T rs138392270 - CDS Nonsynonymous[Thr33Met]
516 .. 516 C/T rs199569305 - CDS Nonsynonymous[Pro40Leu]
517 .. 517 G/A rs150074771 - CDS Synonymous[Pro40Pro]
521 .. 521 G/A rs147786817 - CDS Nonsynonymous[Val42Met]
528 .. 528 C/A rs199700477 - CDS Nonsynonymous[Ala44Glu]
562 .. 562 T/C rs147816445 - CDS Synonymous[Asp55Asp]
647 .. 647 G/A rs148679837 - CDS Nonsynonymous[Val84Ile]
670 .. 670 G/A rs144680956 - CDS Synonymous[Ala91Ala]
691 .. 691 T/C rs140020331 - CDS Synonymous[Ala98Ala]
721 .. 721 C/G rs142836881 - CDS Synonymous[Ala108Ala]
733 .. 733 C/A rs141582665 - CDS Synonymous[Val112Val]
740 .. 740 G/A rs11466259 + CDS Nonsynonymous[Val115Met]
795 .. 795 G/A rs146962706 - CDS Nonsynonymous[Arg133Gln]
822 .. 822 T/A rs200451222 - CDS Nonsynonymous[Leu142His]
830 .. 830 C/T rs147241222 - CDS Nonsynonymous[Arg145Trp]
859 .. 859 G/A rs140828225 - CDS Synonymous[Lys154Lys]
874 .. 874 C/A rs199594512 - CDS AA-STOP[Cys159*]
895 .. 895 T/C rs2166975 - CDS Synonymous[Val166Val]
905 .. 905 C/T rs199990904 - 3'UTR
910 .. 910 G/A rs200314587 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer