H-InvDB x AHG DB
Transcript view
H-InvDB_9.0 released on May 27, 2015.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
H-Invitational ID: HIT000493469 Accession number: AK298845 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; EC=1.5.1.2;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
9 .. 9 G/C rs112979418 - 5'UTR
34 .. 34 A/G rs77157663 + 5'UTR
42 .. 42 C/G/T rs11543045 + 5'UTR
53 .. 53 C/A rs28364597 + 5'UTR
171 .. 171 G/A rs11543043 + CDS Nonsynonymous[Met1Ile]
237 .. 237 C/T rs11543044 + CDS Synonymous[Gly23Gly]
283 .. 283 C/T/A rs146858362 - CDS
303 .. 303 C/G rs144950490 - CDS Synonymous[Leu45Leu]
328 .. 328 C/T rs149894811 - CDS Nonsynonymous[Arg54Cys]
360 .. 360 C/T rs149882706 - CDS Synonymous[Asp64Asp]
361 .. 361 G/A rs150712428 - CDS Nonsynonymous[Val65Ile]
376 .. 376 G/C rs138993893 - CDS Nonsynonymous[Val70Leu]
406 .. 406 G/T rs202095611 - CDS Nonsynonymous[Asp80Tyr]
420 ^ 421 -/C rs35240460 - CDS
442 .. 442 G/A rs200064314 - CDS Nonsynonymous[Val92Met]
456 .. 456 G/A rs148023221 - CDS Synonymous[Ala96Ala]
496 .. 496 G/A rs142577088 - CDS Nonsynonymous[Ala110Thr]
507 .. 507 A/T rs145493247 - CDS Synonymous[Ala113Ala]
544 .. 544 C/T rs199945116 - CDS Nonsynonymous[Arg126Cys]
547 .. 547 C/T rs56362902 - CDS Synonymous[Leu127Leu]
553 .. 553 A/G rs201142342 - CDS Nonsynonymous[Ile129Val]
556 .. 556 C/T rs113324645 - CDS AA-STOP[Gln130*]
561 .. 561 C/T rs55803945 - CDS Synonymous[Leu131Leu]
585 .. 585 T/C rs200949659 - CDS Synonymous[Ala139Ala]
621 .. 621 C/G rs150765933 - CDS Nonsynonymous[Cys151Trp]
622 .. 622 C/T rs201784173 - CDS AA-STOP[Gln152*]
657 .. 657 C/A rs148117976 - CDS Synonymous[Ala163Ala]
699 .. 699 C/T rs138792831 - CDS Synonymous[Arg177Arg]
768 .. 768 T/C rs145431393 - CDS Synonymous[Val200Val]
868 .. 868 C/T rs12753531 - CDS Nonsynonymous[Pro234Ser]
918 .. 918 G/A rs191758097 - CDS Synonymous[Pro250Pro]
1013 .. 1013 G/C rs201293717 - CDS Nonsynonymous[Arg282Pro]
1019 .. 1019 A/G rs200306047 - CDS Nonsynonymous[Glu284Gly]
1160 .. 1160 T/C rs201517157 - CDS Nonsynonymous[Leu331Pro]
1171 .. 1171 G/T rs145906534 - CDS Nonsynonymous[Ala335Ser]
1181 .. 1181 C/T rs201650960 - CDS Nonsynonymous[Ala338Val]
1186 .. 1186 G/A rs41303105 - CDS Nonsynonymous[Gly340Arg]
1202 .. 1202 C/G rs200296829 - CDS Nonsynonymous[Ala345Gly]
1259 .. 1259 C/T rs147571576 - 3'UTR
1268 .. 1268 G/A rs139440539 - 3'UTR
1268 .. 1268 G/A rs75429575 - 3'UTR
1294 .. 1294 G/C rs148675652 - 3'UTR
1317 .. 1317 T/C rs201362049 - 3'UTR
1328 .. 1328 G/A rs146485828 - 3'UTR
1350 .. 1350 C/T rs146082781 - 3'UTR
1386 .. 1386 G/A rs61739581 - 3'UTR
1395 .. 1395 C/T rs150915411 - 3'UTR
1407 .. 1407 C/A rs202201616 - 3'UTR
1413 .. 1413 A/C rs201076564 - 3'UTR
1420 .. 1420 G/A rs146733248 - 3'UTR
1427 .. 1427 G/A rs143958321 - 3'UTR
1432 .. 1432 T/G rs143474754 - 3'UTR
1433 .. 1433 C/G rs200607882 - 3'UTR
1449 .. 1449 C/G rs117876231 - 3'UTR
1458 .. 1458 A/C rs360057 - 3'UTR
1564 .. 1564 T/G rs146506148 - 3'UTR
1581 .. 1581 G/A rs139254695 - 3'UTR
1585 .. 1585 C/G rs35684337 - 3'UTR
1592 .. 1592 T/C rs141038694 - 3'UTR
1599 .. 1599 C/A rs56769658 - 3'UTR
1616 .. 1616 G/A rs200925389 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer